PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_011591-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family C2H2
Protein Properties Length: 412aa    MW: 47302.7 Da    PI: 9.018
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_011591-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00014180203123
                    EEETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                    y+C+ Cg+ ++++ +Lk+H +  H
  NNU_011591-RA 180 YVCGVCGRKCRTNLDLKKHFKQlH 203
                    9******************98766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.10104.2E-7100153IPR029060PIN domain-like
PROSITE profilePS5015710.741180208IPR007087Zinc finger, C2H2
PROSITE patternPS000280182203IPR007087Zinc finger, C2H2
CDDcd061674.26E-14194334No hitNo description
Gene3DG3DSA:3.40.50.10104.2E-7255331IPR029060PIN domain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    Send to blast
MTMRVSPLRN PTDILPLKAY PPILLKIELT NTSTATFPLI TPKFKLNITS GPLVFRNAAA  60
PSKSKRCQWR FEASTADQAA WVLTTEVDMV RDRQGVWTAK QKKVVVLWDL DNKPPRGPPY  120
QAAIALREIA QRFGEVVDIS AYANRHAFIH LPQWVIEERR EHRRTDTLER KGLSTPAEPY  180
VCGVCGRKCR TNLDLKKHFK QLHERERQKK LNRMRSLKGK KRQRYKERFI SGNHKYEDAA  240
RSLLTPKVGY GLASELRRAG VFVKTVEDKP QAADWALKRQ MQHSMTRGID WLFLVSDDSD  300
FSEMLRRAKD SNLRTVVIGD WDRALGRHAD LWVPWIEVEN GEVSEEDLLP RSVRKREEYS  360
EGGEGLFSLT NSDEDSDYDS DLDPVLEELV ITDSQFSGLG ISAFSEGEEN YD
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010263460.10.0PREDICTED: uncharacterized protein LOC104601724
RefseqXP_010263461.10.0PREDICTED: uncharacterized protein LOC104601724
RefseqXP_010263462.10.0PREDICTED: uncharacterized protein LOC104601724
RefseqXP_010263463.10.0PREDICTED: uncharacterized protein LOC104601724
RefseqXP_010263465.10.0PREDICTED: uncharacterized protein LOC104601724
RefseqXP_010263466.10.0PREDICTED: uncharacterized protein LOC104601724
TrEMBLA0A0A0KZU40.0A0A0A0KZU4_CUCSA; Uncharacterized protein
STRINGVIT_18s0001g10130.t010.0(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52010.11e-163C2H2-like zinc finger protein